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clinicalreview education jama review pathophysiology transmission diagnosis andtreatment ofcoronavirusdisease2019 covid 19 areview w joostwiersinga md phd andrewrhodes md phd allenc cheng md phd sharonj peacock phd halliec prescott md msc ...

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                                                                                                                 ClinicalReview&Education
                  JAMA | Review
                  Pathophysiology,Transmission,Diagnosis,andTreatment
                  ofCoronavirusDisease2019(COVID-19)
                  AReview
                  W.JoostWiersinga,MD,PhD;AndrewRhodes,MD,PhD;AllenC.Cheng,MD,PhD;
                  SharonJ.Peacock,PhD;HallieC.Prescott,MD,MSc
                                                                                                             JAMAPatientPage
                     IMPORTANCE Thecoronavirusdisease2019(COVID-19)pandemic,duetothenovelsevere
                     acuterespiratorysyndromecoronavirus2(SARS-CoV-2),hascausedaworldwidesuddenand
                     substantialincreaseinhospitalizationsforpneumoniawithmultiorgandisease.Thisreview
                     discussescurrentevidenceregardingthepathophysiology,transmission,diagnosis,and
                     managementofCOVID-19.
                     OBSERVATIONSSARS-CoV-2isspreadprimarilyviarespiratorydropletsduringclose
                     face-to-facecontact.Infectioncanbespreadbyasymptomatic,presymptomatic,and
                     symptomaticcarriers.Theaveragetimefromexposuretosymptomonsetis5days,and
                     97.5%ofpeoplewhodevelopsymptomsdosowithin11.5days.Themostcommon
                     symptomsarefever,drycough,andshortnessofbreath.Radiographicandlaboratory
                     abnormalities,suchaslymphopeniaandelevatedlactatedehydrogenase,arecommon,but
                     nonspecific.DiagnosisismadebydetectionofSARS-CoV-2viareversetranscription
                     polymerasechainreactiontesting,althoughfalse-negativetestresultsmayoccurinupto
                     20%to67%ofpatients;however,thisisdependentonthequalityandtimingoftesting.
                     ManifestationsofCOVID-19includeasymptomaticcarriersandfulminantdisease
                     characterizedbysepsisandacuterespiratoryfailure.Approximately5%ofpatientswith
                     COVID-19,and20%ofthosehospitalized,experienceseveresymptomsnecessitating
                     intensivecare.Morethan75%ofpatientshospitalizedwithCOVID-19requiresupplemental
                     oxygen.TreatmentforindividualswithCOVID-19includesbestpracticesforsupportive
                     managementofacutehypoxicrespiratoryfailure.Emergingdataindicatethat
                     dexamethasonetherapyreduces28-daymortalityinpatientsrequiringsupplementaloxygen
                     comparedwithusualcare(21.6%vs24.6%;age-adjustedrateratio,0.83[95%CI,
                     0.74-0.92])andthatremdesivirimprovestimetorecovery(hospitaldischargeorno
                     supplementaloxygenrequirement)from15to11days.Inarandomizedtrialof103patients
                     withCOVID-19,convalescentplasmadidnotshortentimetorecovery.Ongoingtrialsare
                     testingantiviraltherapies,immunemodulators,andanticoagulants.Thecase-fatalityratefor
                     COVID-19variesmarkedlybyage,rangingfrom0.3deathsper1000casesamongpatients
                     aged5to17yearsto304.9deathsper1000casesamongpatientsaged85yearsorolderin
                     theUS.Amongpatientshospitalizedintheintensivecareunit,thecasefatalityisupto40%.
                     Atleast120SARS-CoV-2vaccinesareunderdevelopment.Untilaneffectivevaccineis
                     available, theprimarymethodstoreducespreadarefacemasks,socialdistancing,and
                     contacttracing.Monoclonalantibodiesandhyperimmuneglobulinmayprovideadditional
                     preventivestrategies.
                     CONCLUSIONSANDRELEVANCEAsofJuly1,2020,morethan10millionpeopleworldwidehad
                     beeninfectedwithSARS-CoV-2.Manyaspectsoftransmission,infection,andtreatment
                     remainunclear.AdvancesinpreventionandeffectivemanagementofCOVID-19willrequire        AuthorAffiliations:Author
                     basicandclinicalinvestigationandpublichealthandclinicalinterventions.                affiliations are listed at the end of this
                                                                                                          article.
                                                                                                          CorrespondingAuthor:W.Joost
                                                                                                          Wiersinga,MD,PhD,Divisionof
                                                                                                          InfectiousDiseases,Departmentof
                                                                                                          Medicine,AmsterdamUMC,location
                                                                                                          AMC,Meibergdreef9,1105AZ
                                                                                                          Amsterdam,theNetherlands(w.j.
                                                                                                          wiersinga@amsterdamumc.nl).
                                                                                                          SectionEditors:EdwardLivingston,
                     JAMA.doi:10.1001/jama.2020.12839                                                     MD,DeputyEditor,andMaryMcGrae
                     PublishedonlineJuly10,2020.                                                          McDermott,MD,DeputyEditor.
                                                                                                                                (Reprinted) E1
                                                 ©2020AmericanMedicalAssociation.All rights reserved.
   Downloaded From: https://jamanetwork.com/ by Jean Pierre LAROCHEJ on 07/12/2020
                      Clinical Review&Education Review                                          CoronavirusDisease2019(COVID-19)—Epidemiology,Diagnosis,andTreatment
                                hecoronavirus disease 2019 (COVID-19) pandemic has             spike(S)proteinthatbindstotheangiotensin-convertingenzyme
                                                                                                                 7
                                causedasuddensignificantincreaseinhospitalizationsfor          2(ACE2)receptor (Figure2).Thetype2transmembraneserinepro-
                      Tpneumoniawithmultiorgandisease.COVID-19iscausedby                       tease(TMPRSS2),presentinthehostcell,promotesviraluptakeby
                      the novel severe acute respiratory syndrome coronavirus 2 (SARS-         cleavingACE2andactivatingtheSARS-CoV-2Sprotein,whichme-
                      CoV-2).SARS-CoV-2infectionmaybeasymptomaticoritmaycause                  diatescoronavirusentryintohostcells.7ACE2andTMPRSS2areex-
                      awidespectrumofsymptoms,suchasmildsymptomsofupperre-                     pressed in host target cells, particularly alveolar epithelial type II
                      spiratory tract infection and life-threatening sepsis. COVID-19 first    cells.8,9 Similar to other respiratory viral diseases, such as influ-
                      emergedinDecember2019,whenaclusterofpatientswithpneu-                    enza,profoundlymphopeniamayoccurinindividualswithCOVID-19
                      moniaofunknowncausewasrecognizedinWuhan,China.AsofJuly                   whenSARS-CoV-2infectsandkillsTlymphocytecells.Inaddition,
                      1, 2020, SARS-CoV-2hasaffectedmorethan200countries,result-               theviralinflammatoryresponse,consistingofboththeinnateand
                      inginmorethan10millionidentifiedcaseswith508000confirmed                 the adaptive immune response (comprising humoral and cell-
                      deaths(Figure1).Thisreviewsummarizescurrentevidenceregard-               mediatedimmunity),impairslymphopoiesisandincreaseslympho-
                      ing pathophysiology, transmission, diagnosis, and management of          cyteapoptosis.AlthoughupregulationofACE2receptorsfromACE
                      COVID-19.                                                                inhibitorandangiotensinreceptorblockermedicationshasbeenhy-
                                                                                               pothesizedtoincreasesusceptibilitytoSARS-CoV-2infection,large
                                                                                               observationalcohortshavenotfoundanassociationbetweenthese
                      Methods                                                                  medications and risk of infection or hospital mortality due to
                                                                                                          10,11
                                                                                               COVID-19.      Forexample,inastudy4480patientswithCOVID-19
                      WesearchedPubMed,LitCovid,andMedRxivusingthesearchterms                  fromDenmark,previoustreatmentwithACEinhibitorsorangioten-
                      coronavirus,severeacuterespiratorysyndromecoronavirus2,2019-             sinreceptorblockerswasnotassociatedwithmortality.11
                      nCoV,SARS-CoV-2,SARS-CoV,MERS-CoV,andCOVID-19forstudies                       Inlaterstagesofinfection,whenviralreplicationaccelerates,epi-
                      published from January 1, 2002, to June 15, 2020, and manually           thelial-endothelialbarrierintegrityiscompromised.Inadditiontoepi-
                      searchedthereferencesofselectarticlesforadditionalrelevantar-            thelialcells,SARS-CoV-2infectspulmonarycapillaryendothelialcells,
                      ticles.Ongoingorcompletedclinicaltrialswereidentifiedusingthe            accentuatingtheinflammatoryresponseandtriggeringaninfluxof
                      diseasesearchtermcoronavirusinfectiononClinicalTrials.gov,the            monocytesandneutrophils.Autopsystudieshaveshowndiffusethick-
                      ChineseClinicalTrialRegistry,andtheInternationalClinicalTrialsReg-       eningofthealveolarwallwithmononuclearcellsandmacrophages
                      istry Platform. We selected articles relevant to a general medicine      infiltratingairspacesinadditiontoendothelialitis.12Interstitialmono-
                      readership, prioritizing randomized clinical trials, systematic re-      nuclear inflammatory infiltrates and edema develop and appear as
                      views,andclinicalpracticeguidelines.                                     ground-glass opacities on computed tomographic imaging. Pulmo-
                                                                                               naryedemafillingthealveolarspaceswithhyalinemembraneforma-
                                                                                               tion follows, compatible with early-phase acute respiratory distress
                      Observations                                                             syndrome(ARDS).12Bradykinin-dependentlungangioedemamay
                                                                                                                     13
                                                                                               contributetodisease. Collectively,endothelialbarrierdisruption,dys-
                      Pathophysiology                                                          functionalalveolar-capillaryoxygentransmission,andimpairedoxy-
                      Coronaviruses are large, enveloped, single-stranded RNA viruses          gendiffusioncapacityarecharacteristicfeaturesofCOVID-19.
                      foundinhumansandothermammals,suchasdogs,cats,chicken,                         InsevereCOVID-19,fulminantactivationofcoagulationandcon-
                      cattle, pigs, and birds. Coronaviruses cause respiratory, gastroin-      sumptionofclottingfactorsoccur.14,15AreportfromWuhan,China,
                      testinal, and neurological disease. The most common coronavi-            indicatedthat71%of183individualswhodiedofCOVID-19metcri-
                      rusesinclinicalpracticeare229E,OC43,NL63,andHKU1,whichtypi-              teriafordiffuseintravascularcoagulation.14Inflamedlungtissuesand
                      cally cause common cold symptoms in immunocompetent                      pulmonaryendothelialcellsmayresultinmicrothrombiformationand
                      individuals.SARS-CoV-2isthethirdcoronavirusthathascausedse-              contribute to the high incidence of thrombotic complications, such
                                                                                       1
                      verediseaseinhumanstospreadgloballyinthepast2decades. The                as deepvenousthrombosis,pulmonaryembolism,andthrombotic
                      first coronavirus that caused severe disease was severe acute re-        arterial complications (eg, limb ischemia, ischemic stroke, myocar-
                      spiratory syndrome (SARS), which was thought to originate in             dialinfarction)incriticallyillpatients.16Thedevelopmentofviralsep-
                                                                                           2
                      Foshan,China,andresultedinthe2002-2003SARS-CoVpandemic.                  sis, defined as life-threatening organ dysfunction caused by a dys-
                      Thesecondwasthecoronavirus-causedMiddleEastrespiratorysyn-               regulated host response to infection, may further contribute to
                                                                                           3
                      drome(MERS),whichoriginatedfromtheArabianpeninsulain2012.                multiorganfailure.
                           SARS-CoV-2hasadiameterof60nmto140nmanddistinc-
                      tive spikes, ranging from 9 nm to 12 nm, giving the virions the ap-      TransmissionofSARS-CoV-2Infection
                      pearance of a solar corona (Figure 2).4 Through genetic recombi-         Epidemiologic data suggest that droplets expelled during face-to-
                      nation and variation, coronaviruses can adapt to and infect new          faceexposureduringtalking,coughing,orsneezingisthemostcom-
                      hosts.BatsarethoughttobeanaturalreservoirforSARS-CoV-2,but               monmodeoftransmission(Box1).Prolongedexposuretoanin-
                      it has been suggested that humans became infected with SARS-             fectedperson(beingwithin6feetforatleast15minutes)andbriefer
                                                                              5,6
                      CoV-2viaanintermediatehost,suchasthepangolin.                            exposurestoindividualswhoaresymptomatic(eg,coughing)areas-
                                                                                               sociated with higher risk for transmission, while brief exposures to
                      TheHostDefenseAgainstSARS-CoV-2                                          asymptomaticcontactsarelesslikelytoresultintransmission.25Con-
                      Earlyininfection,SARS-CoV-2targetscells,suchasnasalandbron-              tactsurfacespread(touchingasurfacewithvirusonit)isanotherpos-
                      chial epithelial cells and pneumocytes, throughtheviralstructural        siblemodeoftransmission.Transmissionmayalsooccurviaaerosols
              E2      JAMA PublishedonlineJuly 10,2020 (Reprinted)                                                                                          jama.com
                                                             ©2020AmericanMedicalAssociation.All rights reserved.
    Downloaded From: https://jamanetwork.com/ by Jean Pierre LAROCHEJ on 07/12/2020
                               CoronavirusDisease2019(COVID-19)—Epidemiology,Diagnosis,andTreatment                                                                                    Review ClinicalReview&Education
                               Figure1.KeyEventsintheEarlyCoronavirusDisease2019(COVID-19)Pandemic
                                   190 000                                                                                                                                            June 29: Global reported 
                                   180 000           WHO region                                                                                                                       COVID-19 cases exceeds 
                                   170 000              Africa                                                                                                                        10 million
                                   160 000              Americas
                                   150 000              Eastern Mediterranean
                                   140 000              Europe
                                   130 000              Southeast Asia
                                   120 000              Western Pacific
                                   110 000              Other
                                   100 000
                                  Cases per day90 000
                                     80 000
                                     70 000
                                     60 000
                                     50 000
                                     40 000
                                     30 000
                                     20 000
                                     10 000
                                           0
                                                Dec    Jan    Jan   Jan    Jan    Feb   Feb    Feb    Feb  Mar    Mar    Mar   Mar    Mar    Apr   Apr    Apr          May          May           Jun          Jun           Jun
                                                 30     6     13     20    27      3     10    17     24    2      9     16     23    30      6     13    20            4            18            1            15           29
                                               2019 2020 2020 2020 2020 2020 2020 2020 20202020 2020 2020 2020 2020 2020 2020 2020                                     2020         2020         2020          2020         2020
                                              Dec               Jan                        Feb                        Mar                         Apr                             May                         June
                                 Dec 31: China alerts WHO       Jan 13: First confirmed     Feb 2: First confirmed         Mar 11: WHO declares        Apr 1: No. of                 May 9: No. of global
                                 on a cluster of cases of       case outside of China       death outside China            the coronavirus             confirmed cases of            reported COVID-19 cases
                                 pneumonia with unknown         (Thailand) in a traveler    (Philippines) of a Chinese     outbreak a pandemic         COVID-19 exceeds              exceeds 4 million
                                 cause in Wuhan                 who has visited Wuhan       man from Wuhan                                             1 million
                                 Jan 7: WHO officials             Jan 30: WHO declares coronavirus a         Feb 11: WHO announces         March 16: More       April 9: Italy has reached     May 22: South America at
                                 announce they have               global emergency with cases reported       that the new disease          cases outside        transmission peak with         center of pandemic with more
                                 identified a new                 in US, Japan, Nepal, France, Australia,    caused by SARS-CoV-2          mainland China       more than 132 000 cases        than 330 000 cases in Brazil 
                                 coronavirus initially            Malaysia, Singapore, South Korea,          is named “COVID-19”           than within                                         alone
                                 named 2019-nCoV                  Vietnam, and Taiwan
                                                                 Feb 14: Egypt first country in Africa    Mar 18: WHO launches International        April 28: No. of cases in US               June 29: No. of global
                                                                 to report a case and France reports      Solidarity Trial aiming to find the       surpasses 1 million with 58 000            reported COVID-19 cases
                                                                 Europes first death from the virus      most effective treatments for             confirmed deaths                           exceeds 10 million
                                                                                                          COVID-19
                               BasedondatafromWorldHealthOrganization(WHO)COVID-19situationreports.TheCOVID-19outbreakwasfirstrecognizedinWuhan,China,inearly
                               December2019.ThenumberofconfirmedCOVID-19casesisdisplayedbydateofreportandWHOregion.SARS-CoV-2indicatessevereacuterespiratory
                               syndromecoronavirus2.
                               (smallerdropletsthatremainsuspendedinair),butitisunclearifthis                                       upto3to4daysafterinoculation.32Widespreadviralcontamina-
                                                                                                                                                                                                           28
                               is a significant source of infection in humans outside of a laboratory                               tion of hospital rooms has been documented.                                However, it is
                               setting.26,27 The existence of aerosols in physiological states                                      thoughtthattheamountofvirusdetectedonsurfacesdecaysrap-
                               (eg,coughing)orthedetectionofnucleicacidintheairdoesnotmean                                          idlywithin48to72hours.32Althoughthedetectionofvirusonsur-
                               thatsmallairborneparticlesareinfectious.28MaternalCOVID-19iscur-                                     facesreinforcesthepotentialfortransmissionviafomites(objects
                               rently believed to be associated with low risk for vertical transmis-                                suchasadoorknob,cutlery,orclothingthatmaybecontaminated
                               sion. In most reported series, the mothers' infection with SARS-                                     with SARS-CoV-2) and the need for adequate environmental hy-
                               CoV-2occurredinthethirdtrimesterofpregnancy,withnomaternal                                           giene,dropletspreadviaface-to-facecontactremainstheprimary
                                                                                                           29-31
                               deathsandafavorableclinicalcourseintheneonates.                                                      modeoftransmission.
                                     Theclinical significance of SARS-CoV-2 transmission from in-                                         Viralloadintheupperrespiratorytractappearstopeakaround
                               animatesurfacesisdifficulttointerpretwithoutknowingthemini-                                          the time of symptom onset and viral shedding begins approxi-
                               mumdoseofvirusparticlesthatcaninitiateinfection.Viralloadap-                                         mately 2 to 3 days prior to the onset of symptoms.33 Asymptom-
                               pearstopersistathigherlevelsonimpermeablesurfaces,suchas                                             atic andpresymptomaticcarrierscantransmitSARS-CoV-2.34,35In
                               stainless steel and plastic, than permeable surfaces, such as                                        Singapore,presymptomatictransmissionhasbeendescribedinclus-
                                               32
                               cardboard.         Virushasbeenidentifiedonimpermeablesurfacesfor                                    tersofpatientswithclosecontact(eg,throughchurchgoingorsinging
                               jama.com                                                                                                                            (Reprinted) JAMA PublishedonlineJuly 10,2020                             E3
                                                                                    ©2020AmericanMedicalAssociation.All rights reserved.
     Downloaded From: https://jamanetwork.com/ by Jean Pierre LAROCHEJ on 07/12/2020
                          Clinical Review&Education Review                                                    CoronavirusDisease2019(COVID-19)—Epidemiology,Diagnosis,andTreatment
                          Figure2.ImmunopathogenesisofCoronavirusDisease2019(COVID-19)
                             A SARS-CoV-2 viral infection of host airway cells
                                      SARS-CoV-2 virion
                                           Viral RNA                   S protein        ACE2
                                                                   TMPRSS2              receptor
                                                             TMPRSS2 activates viral S protein and 
                                                             cleaves ACE2 receptor to facilitate        Virus enters host cell via endocytosis, 
                                                             viral binding to host cell membrane.       releases its RNA, and uses cell machinery        One infected host cell can create 
                                                                                                        to replicate itself and assemble more virions.   hundreds of new virions, rapidly 
                                                                         HOST AIRWAY CELL                                                                progressing infection.
                             B Early-stage COVID-19
                                 Bronchial epithelial cells, type I and type II alveolar 
                                 pneumocytes, and capillary endothelial cells are                   ALVEOLAR LUMEN                                   Neutrophil
                                 infected, and an inflammatory response ensues.                                                 Monocyte
                                                                 Infected
                                                                 type II pneumocyte        SARS-CoV-2                       T lymphocyte                              Macrophage
                                                                                           virus release
                                                                                                                       T lymphocyte, monocyte, 
                                                                                                   Type I              and neutrophil recruitment
                                                                                                   pneumocyte                                           TNF-α
                                                                                                                                                         IL-1
                                                                                                                                                         IL-6
                                                                                                                                                Cytokine release enhances
                                                                                                                                                inflammatory response
                                        ALVEOLUS                      ALVEOLAR CAPILLARY
                                                                              Capillary
                                                                              endothelial cell
                             C Late-stage COVID-19
                                 Continued inflammatory response results in  
                                 alveolar interstitial thickening, increased 
                                 vascular permeability, and edema.
                                                           Thickened                               Pulmonary edema                                      Increased
                                                           interstitium                                                                                 T lymphocyte apoptosis
                                                                                   Hyaline membrane
                                                                                   formation
                                                                                                                    Influx of monocytes
                                                          Increased                                                 and neutrophils
                                                          vascular permeability
                                                                                                                                                Activation of coagulation leads 
                                                                                                                                                to microthrombus formation
                                                                                                                                                                       Pulmonary
                                    Activation of the kinin-kallikrein system                                                                                          thrombus
                                    can further contribute to local vascular 
                                    leakage leading to angioedema.
                          Currentunderstandingofthesevereacuterespiratorysyndromecoronavirus2                 earlystage,viralcopynumberscanbehighinthelowerrespiratorytract.
                          (SARS-CoV-2)–inducedhostimmuneresponse.SARS-CoV-2targetscells                       Inflammatorysignalingmoleculesarereleasedbyinfectedcellsandalveolar
                          throughtheviralstructuralspike(S)proteinthatbindstotheangiotensin-                  macrophagesinadditiontorecruitedTlymphocytes,monocytes,and
                          convertingenzyme2(ACE2)receptor.Theserineproteasetype2                              neutrophils.Inthelatestage,pulmonaryedemacanfillthealveolarspaceswith
                          transmembraneserineproteas(TMPRSS2)inthehostcellfurtherpromotes                     hyalinemembraneformation,compatiblewithearly-phaseacuterespiratory
                          viral uptakebycleavingACE2andactivatingtheSARS-CoV-2Sprotein.Inthe                  distresssyndrome.
                E4        JAMA PublishedonlineJuly 10,2020 (Reprinted)                                                                                                             jama.com
                                                                      ©2020AmericanMedicalAssociation.All rights reserved.
    Downloaded From: https://jamanetwork.com/ by Jean Pierre LAROCHEJ on 07/12/2020
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...Clinicalreview education jama review pathophysiology transmission diagnosis andtreatment ofcoronavirusdisease covid areview w joostwiersinga md phd andrewrhodes allenc cheng sharonj peacock halliec prescott msc jamapatientpage importance thecoronavirusdisease pandemic duetothenovelsevere acuterespiratorysyndromecoronavirus sars cov hascausedaworldwidesuddenand substantialincreaseinhospitalizationsforpneumoniawithmultiorgandisease thisreview discussescurrentevidenceregardingthepathophysiology and managementofcovid observationssars isspreadprimarilyviarespiratorydropletsduringclose face to facecontact infectioncanbespreadbyasymptomatic presymptomatic symptomaticcarriers theaveragetimefromexposuretosymptomonsetisdays ofpeoplewhodevelopsymptomsdosowithin days themostcommon symptomsarefever drycough andshortnessofbreath radiographicandlaboratory abnormalities suchaslymphopeniaandelevatedlactatedehydrogenase arecommon but nonspecific diagnosisismadebydetectionofsars viareversetranscription p...

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